PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.SB6JF
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 339aa    MW: 37541.8 Da    PI: 6.9197
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.SB6JFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.21.3e-12182229355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  + h ++Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  Araip.SB6JF 182 QDHVIAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 229
                  6799************************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.682179228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-10182229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-17183242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-17183247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.04E-13184233No hitNo description
SMARTSM003531.7E-14185234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MDESVFFHNQ YPMMDSSTIT SSPTPWPQIN LDDIDFNQIQ ESFSSASSPK SYTSNKRFNS  60
SFSPIERPTK QQKNAYSHGI STNTTTTTSN EFMVPKASSS SSSQIISFEQ HSNASSVASY  120
NHHHQQLYNN NPSSDQGNHV LKPKTESVCS ENLDFASVVS QADKANKGSA GAATTRNPTQ  180
AQDHVIAERK RREKLSQRFI ALSAIVPGLK KMDKASVLGD AIKYLKQLQE KVKILEEQVA  240
EKTVESAVFV KRSILFAEDN GSSSEENPEI EARISGKDVL IRIHCDKHSG IVPKIINEIE  300
KHDLSVQSSS FLPFGNNSLD ITIVAQVNIN FNFSLINLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187192ERKRRE
2188193RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016186551.10.0PREDICTED: transcription factor bHLH18
RefseqXP_016186555.10.0PREDICTED: transcription factor bHLH18
RefseqXP_016186558.10.0PREDICTED: transcription factor bHLH18
TrEMBLA0A0B2SRQ21e-105A0A0B2SRQ2_GLYSO; Transcription factor bHLH25
TrEMBLK7KPK51e-105K7KPK5_SOYBN; Uncharacterized protein
STRINGGLYMA05G23291.11e-104(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-52bHLH family protein